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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015947334.1_cds_XP_016489106.1_79668
CDS Infomation

[gene=LOC107809029] [db_xref=GeneID:107809029] [protein=splicing factor U2af large subunit B-like isoform X4] [protein_id=XP_016489106.1] [location=complement(join(28994..29131,29779..29846,30496..30577,30690..30788,31281..31347,32153..32241,33492..33567,33651..33749,35397..35512,36575..36687,36771..36831,38801..38860,38939..38992,39120..39155))] [gbkey=CDS]
Sequence

ATGTTACAAAATGTATTTCCAACTGATACAATTCAGGTTAATCAGTTGGGTTCTTTCCCT
TTCTTGCCAGTTCAAGCCATGAGTCAGCAAGCTACAAGACATGCACGACGTGTCTATGTT
GGTGGCCTCCCACCACTGGCTAATGAACAGACAATCTCGGCATTTTTTAGTCATGTTATG
AGTGCAGTTGGTGGAAATTCTGCTGGTCCAGGCGATGCAGTTGTCAATGTGTACATTAAT
CATGAAAAGAAGTTTGCATTTGTGGAGATGAGGACAGTTGAAGAAGCCAGTAATGCAATG
GCATTAGATGGAGTTGTTTTTGAGGGTGTTTCTGTCAGGGTTCGAAGGCCTACTGATTAC
AATCCTTCTTTGGCTGCTGCACTTGGTCCTGGCCATCCAAGCCCTCACCTTAACTTAACT
GCTGCTGGGCTTACGCCTGGAGCAACTGGGGATGCGGAGGAACCTGATCGTATTTTTGTT
GGTGGATTGCCATACCTTTTTACTGAAGTGCAGATAAAAGACCTACTGGAGTCTTTTGGA
CCCTTGCGCAGATTTGAGGTGGTGAAGGATAGAGAGACAGGAAACTCTAAAGGTTATGGT
TTCTGCACATATCAGGATCCATTAGTTACAGACATTGCTTGTGCTGCGTTAAACGGCTTA
AAGATGGGTGACAAGACACTGACGGTTCGGCGTGCTACCTCTAGCAGTGGGCAGGTGAAG
TCAGAACAGGAGTGTATATTAGCTCAGGCAAGGCAACATATAGCTATGCAGAAAATGGCT
TTTGAAGCTGGTGGTATGACTATTCCTGGTACCGAGATAGGGCCTGTTGTGACTGCTGAG
ATTCCAACCAAGGTGTTATGCTTAACTGAGGTAATTACCCCTCAAGAATTGTTTGATGAC
GTAGAGTATGGAGAAATTTTGGAAGACATGAAAGAAGAAGGCCGGAAATTTGGTGACTTG
ATTGATGTTGTTATACCTCGGCCAGAACCTGATCGTCAAATTATCGAAGGTCATGGGAAG
GTATTTCTGGAGTACTCGGACATTACTGGTTGTAGCAATGCAAAGGCTGCACTTGCTGGC
AGGAAATTTGGAGGAAATACTGTCATTGCCATTTATTATCCTGAAGACAAATACTATGAC
AAGGATTATGCCTCTTAG

Peptide Sequence

PEP ID

XP_016489106.1
PEP Infomation

PREDICTED: splicing factor U2af large subunit B-like isoform X4 [Nicotiana tabacum]
Sequence

MLQNVFPTDTIQVNQLGSFPFLPVQAMSQQATRHARRVYVGGLPPLANEQTISAFFSHVM
SAVGGNSAGPGDAVVNVYINHEKKFAFVEMRTVEEASNAMALDGVVFEGVSVRVRRPTDY
NPSLAAALGPGHPSPHLNLTAAGLTPGATGDAEEPDRIFVGGLPYLFTEVQIKDLLESFG
PLRRFEVVKDRETGNSKGYGFCTYQDPLVTDIACAALNGLKMGDKTLTVRRATSSSGQVK
SEQECILAQARQHIAMQKMAFEAGGMTIPGTEIGPVVTAEIPTKVLCLTEVITPQELFDD
VEYGEILEDMKEEGRKFGDLIDVVIPRPEPDRQIIEGHGKVFLEYSDITGCSNAKAALAG
RKFGGNTVIAIYYPEDKYYDKDYAS

Transcript Sequence

Gene sequence data has not been registered.